Predictions for RefSeq genomes

Trait prediction parameters

model name avre
model description Organism is a plant pathogen (based on AvrE virulence factor) (M)
model train date 2019-02-01 14:12:49
maximal accuracy 0.88

Legend:  + = trait present  - = trait absent

Assembly id Taxon name Prediction result Prediction confidence Balanced accuracy
GCF_000423185.1 Inquilinus limosus DSM 16000 - 0.81 0.87
GCF_002211445.1 Noviherbaspirillum denitrificans - 0.80 0.87
GCF_002116905.1 Rhizobacter gummiphilus - 0.83 0.88
GCF_002091755.1 Pseudomonas nitroreducens NBRC 12694 - 0.96 0.88
GCF_002091635.1 Pseudomonas indica NBRC 103045 - 0.89 0.88
GCF_900141925.1 Pseudomonas zeshuii - 0.85 0.88
GCF_900116605.1 Pseudomonas marincola - 0.93 0.88
GCF_900115555.1 Pseudomonas borbori - 0.93 0.88
GCF_900115715.1 Pseudomonas sagittaria - 0.85 0.88
GCF_900111835.1 Pseudomonas otitidis - 0.95 0.88
GCF_900113745.1 Pseudomonas guineae - 0.88 0.88
GCF_900109735.1 Pseudomonas hussainii - 0.84 0.88
GCF_900108595.1 Pseudomonas fuscovaginae - 0.89 0.87
GCF_900105355.1 Pseudomonas anguilliseptica - 0.88 0.88
GCF_900104845.1 Paraburkholderia caballeronis - 0.82 0.88
GCF_900106975.1 Pseudomonas kuykendallii - 0.90 0.88
GCF_900105255.1 Pseudomonas sabulinigri - 0.82 0.88
GCF_900105885.1 Pseudomonas guangdongensis - 0.80 0.88
GCF_900104945.1 Pseudomonas xinjiangensis - 0.81 0.88
GCF_900105995.1 Pseudomonas pohangensis - 0.82 0.88
GCF_900104805.1 Pseudomonas oryzae - 0.84 0.88
GCF_900100495.1 Pseudomonas benzenivorans - 0.94 0.88
GCF_900103845.1 Pseudomonas jinjuensis - 0.94 0.88
GCF_001078275.1 Bordetella hinzii - 0.81 0.88
GCF_001411495.1 Burkholderia cepacia ATCC 25416 - 0.81 0.88
GCF_001534745.1 Pseudomonas monteilii - 0.83 0.88
GCF_001556675.1 Xylophilus ampelinus - 0.83 0.87
GCF_000007565.2 Pseudomonas putida KT2440 - 0.95 0.88
GCF_001598255.1 Mitsuaria chitosanitabida NBRC 102408 - 0.81 0.88
GCF_001591385.1 Variovorax soli NBRC 106424 - 0.82 0.87
GCF_001597285.1 Pseudomonas alcaligenes - 0.91 0.88
GCF_001644705.1 Dickeya solani IPO 2222 + 0.89 0.87
GCF_001654435.1 Pseudomonas citronellolis - 0.96 0.87
GCF_001545035.1 Caballeronia glebae - 0.80 0.88
GCF_000006765.1 Pseudomonas aeruginosa PAO1 - 0.95 0.88
GCF_000007805.1 Pseudomonas syringae pv. tomato str. DC3000 + 0.94 0.88
GCF_000013645.1 Paraburkholderia xenovorans LB400 - 0.80 0.88
GCF_000012245.1 Pseudomonas syringae pv. syringae B728a + 0.93 0.88
GCF_000016565.1 Pseudomonas mendocina ymp - 0.95 0.88
GCF_000018665.1 Delftia acidovorans SPH-1 - 0.84 0.88
GCF_000020045.1 Paraburkholderia phymatum STM815 - 0.83 0.87
GCF_000023605.1 Pectobacterium carotovorum subsp. carotovorum PC1 + 0.93 0.88
GCF_000425625.1 Pseudomonas azotifigens DSM 17556 - 0.91 0.88
GCF_000067205.1 Bordetella petrii - 0.81 0.87
GCF_000025065.1 Dickeya zeae Ech586 + 0.93 0.88
GCF_000590475.1 Pseudomonas stutzeri - 0.92 0.87
GCF_000091565.1 Erwinia amylovora CFBP1430 + 0.93 0.88
GCF_000698595.1 Caballeronia glathei - 0.84 0.87
GCF_000698575.1 Caballeronia zhejiangensis - 0.81 0.87
GCF_000745855.1 Xenophilus azovorans DSM 13620 - 0.81 0.87
GCF_000756775.1 Pseudomonas saudiphocaensis - 0.89 0.88
GCF_000785435.1 Paraburkholderia sacchari - 0.82 0.88
GCF_000800615.1 Pseudomonas putida - 0.95 0.88
GCF_000806415.1 Pseudomonas flexibilis - 0.88 0.88
GCF_000818015.1 Pseudomonas balearica DSM 6083 - 0.92 0.88
GCF_000817975.1 Azotobacter chroococcum NCIMB 8003 - 0.83 0.88
GCF_000192865.1 Marinomonas mediterranea MMB-1 + 0.94 0.88
GCF_000832305.1 Cupriavidus basilensis - 0.82 0.88
GCF_000196615.1 Erwinia billingiae Eb661 - 0.94 0.87
GCF_000196015.1 Cupriavidus metallidurans CH34 - 0.85 0.88
GCF_000184745.1 Variovorax paradoxus EPS - 0.81 0.88
GCF_000213805.1 Pseudomonas fulva 12-X - 0.95 0.88
GCF_000219605.1 Pseudomonas stutzeri - 0.94 0.88
GCF_000974605.1 Cupriavidus pauculus - 0.84 0.88
GCF_000237065.1 Pseudomonas fluorescens F113 - 0.95 0.88
GCF_000300005.1 Alcanivorax dieselolei B5 - 0.84 0.88
GCF_000219215.1 Cupriavidus necator N-1 - 0.85 0.87
GCF_000498575.1 Pseudomonas taeanensis MS-3 - 0.93 0.88
GCF_000465555.1 Pantoea dispersa EGD-AAK13 - 0.81 0.87
GCF_001457475.1 Achromobacter xylosoxidans - 0.85 0.88
GCF_000380335.1 Azotobacter vinelandii CA - 0.84 0.88
GCF_000364625.1 Pseudomonas thermotolerans DSM 14292 - 0.90 0.88
GCF_000382045.1 Variovorax paradoxus 110B - 0.82 0.88
GCF_000410875.1 Pseudomonas pelagia CL-AP6 - 0.84 0.87
GCF_000412695.1 Pseudomonas resinovorans NBRC 106553 - 0.95 0.88
GCF_000400505.1 Dickeya paradisiaca NCPPB 2511 - 0.93 0.87
GCF_000397205.1 Pseudomonas protegens CHA0 - 0.95 0.87