Training data

Legend:  + = trait present  - = trait absent

Genome accession Scientific name Trait presence
GCF_000214035.1 Methyloversatilis universalis FAM5 -
GCF_000735435.1 Raoultella planticola ATCC 33531 -
GCF_000222025.1 Haemophilus haemolyticus M19501 -
GCF_000318405.1 Brevundimonas diminuta 470-4 -
GCF_000318135.1 Corynebacterium durum F0235 -
GCF_000238795.1 Haemophilus sputorum CCUG 13788 -
GCF_000270305.1 Clostridium sp. SY8519 +
GCF_000219275.1 Acinetobacter lwoffii WJ10621 -
GCF_000221985.1 Streptococcus pseudopneumoniae IS7493 -
GCF_000283495.2 Megasphaera elsdenii DSM 20460 +
GCF_000248035.1 Gordonia terrae NBRC 100016 -
GCF_000257785.1 Streptococcus constellatus subsp. constellatus SK53 -
GCF_000241285.1 Pantoea agglomerans IG1 -
GCF_000484655.1 Blautia wexlerae DSM 19850 -
GCF_000620985.1 Brochothrix thermosphacta DSM 20171 = FSL F6-1036 -
GCF_000379665.1 Butyricimonas synergistica DSM 23225 +
GCF_000519105.1 Butyricimonas virosa DSM 23226 +
GCF_000359585.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 +
GCF_000375525.1 Corynebacterium propinquum DSM 44285 -
GCF_000420645.1 Nevskia ramosa DSM 11499 -
GCF_000378385.1 Paenibacillus daejeonensis DSM 15491 -
GCF_000378725.1 Peptoniphilus lacrimalis DSM 7455 +
GCF_000372405.1 Porphyromonas somerae DSM 23386 +
GCF_000378085.1 Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 -
GCF_000425525.1 Ruminococcus gauvreauii DSM 19829 -
GCF_000425005.1 Solobacterium moorei DSM 22971 +
GCF_000258205.1 Rothia aeria F0474 -
GCF_000248095.2 Lactobacillus mucosae LM1 -
GCF_000296575.1 Brachyspira pilosicoli B2904 +
GCF_000406965.1 Enterococcus avium ATCC 14025 -
GCF_000247775.1 Lactobacillus gastricus PS3 -
GCF_000770985.1 Bifidobacterium scardovii JCM 12489 = DSM 13734 -
GCF_000479335.1 Streptococcus sp. I-G2 -
GCF_000275465.1 Alcaligenes faecalis subsp. faecalis NCIB 8687 +
GCF_000297455.1 Staphylococcus equorum subsp. equorum Mu2 -
GCF_000401215.1 Clostridium sartagoforme AAU1 +
GCF_000398925.1 Butyricicoccus pullicaecorum 1.2 +
GCF_000293805.1 Paenibacillus alvei DSM 29 -
GCF_000295715.1 Staphylococcus arlettae CVD059 -
GCF_000621245.1 Pseudomonas monteilii NBRC 103158 = DSM 14164 -
GCF_000369085.1 Acinetobacter haemolyticus NIPH 261 -
GCF_000739855.1 Alcaligenes faecalis subsp. faecalis NBRC 13111 +
GCF_000298875.1 Leuconostoc gelidum JB7 -
GCF_000314575.1 Brevibacterium casei S18 -
GCF_000313955.2 Lysinibacillus fusiformis ZB2 -
GCF_000403825.2 Parabacteroides goldsteinii dnLKV18 -
GCF_000467875.1 Prevotella disiens JCM 6334 = ATCC 29426 -
GCF_000347695.1 Bifidobacterium thermophilum RBL67 -
GCF_000469345.1 Eubacterium ramulus ATCC 29099 +
GCF_000328885.1 Enterobacter hormaechei YT3 -
GCF_000342105.1 Bacillus sonorensis L12 -
GCF_000381725.1 Fusobacterium russii ATCC 25533 +
GCF_000424025.1 Clostridium paraputrificum AGR2156 +
GCF_000424205.1 Clostridium cadaveris AGR2141 +
GCF_000424305.1 Pseudobutyrivibrio ruminis AD2017 +
GCF_000349565.1 Curtobacterium flaccumfaciens UCD-AKU -
GCF_000565285.1 Bacillus firmus DS1 -
GCF_000390025.1 Gordonia terrae C-6 -
GCF_000409755.1 Clostridium butyricum DSM 10702 +
GCF_000488855.1 Eubacterium brachy ATCC 33089 +
GCF_000417625.1 Vibrio fluvialis PG41 -
GCF_000422085.1 Serratia liquefaciens ATCC 27592 -
GCF_000733845.1 Geobacillus vulcani PSS1 -
GCF_000687995.1 Selenomonas ruminantium AC2024 -
GCF_000521965.1 Citrobacter freundii UCI 31 -
GCF_000621725.1 Prevotella brevis ATCC 19188 -
GCF_000702045.1 Succinivibrio dextrinosolvens H5 -
GCF_000513495.2 Staphylococcus cohnii hu-01 -
GCF_000517665.1 Rhodococcus rhodochrous ATCC 21198 -
GCF_000771345.1 Bifidobacterium coryneforme DSM 20216 -
GCF_000741285.1 Bifidobacterium mongoliense DSM 21395 -
GCF_000599565.1 Trueperella pyogenes MS249 -
GCF_000708125.1 Aeromonas jandaei Riv2 -
GCF_000007645.1 Staphylococcus epidermidis ATCC 12228 -
GCF_000013285.1 Clostridium perfringens ATCC 13124 +
GCF_000007525.1 Bifidobacterium longum NCC2705 -
GCF_000196095.1 Vibrio parahaemolyticus RIMD 2210633 -
GCF_000007785.1 Enterococcus faecalis V583 -
GCF_000010105.1 Rhodococcus erythropolis PR4 -
GCF_000007585.1 Porphyromonas gingivalis W83 +
GCF_000261025.1 Prevotella intermedia 17 -
GCF_000148585.2 Streptococcus mitis NCTC 12261 -
GCF_000011825.1 Streptococcus thermophilus LMG 18311 -
GCF_000025985.1 Bacteroides fragilis NCTC 9343 -
GCF_000008765.1 Clostridium acetobutylicum ATCC 824 +
GCF_000011985.1 Lactobacillus acidophilus NCFM -
GCF_000006865.1 Lactococcus lactis subsp. lactis Il1403 -
GCF_000018045.1 Citrobacter koseri ATCC BAA-895 -
GCF_000017665.1 Cronobacter sakazakii ATCC BAA-894 -
GCF_000016965.1 Clostridium beijerinckii NCIMB 8052 +
GCF_000014405.1 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 -
GCF_000010185.1 Finegoldia magna ATCC 29328 +
GCF_000020225.1 Akkermansia muciniphila ATCC BAA-835 -
GCF_000010165.1 Brevibacillus brevis NBRC 100599 -
GCF_000010425.1 Bifidobacterium adolescentis ATCC 15703 -
GCF_000014805.1 Aeromonas hydrophila subsp. hydrophila ATCC 7966 -
GCF_000014205.1 Streptococcus sanguinis SK36 -
GCF_000018665.1 Delftia acidovorans SPH-1 -
GCF_000169235.1 Dorea formicigenerans ATCC 27755 -
GCF_000153885.1 Eubacterium ventriosum ATCC 27560 +
GCF_000156375.1 Desulfovibrio piger ATCC 29098 -
GCF_000154405.1 Parvimonas micra ATCC 33270 -
GCF_000157955.1 Subdoligranulum variabile DSM 15176 +
GCF_000154425.1 Coprococcus eutactus ATCC 27759 +
GCF_000239295.1 Flavonifractor plautii ATCC 29863 +
GCF_000154105.1 Parabacteroides merdae ATCC 43184 -
GCF_000162015.1 Faecalibacterium prausnitzii A2-165 +
GCF_000154545.1 Clostridium sp. SS2/1 +
GCF_000154385.1 Faecalibacterium prausnitzii M21/2 +
GCF_000154245.1 Clostridium sp. L2-50 +
GCF_000154305.1 Anaerostipes caccae DSM 14662 +
GCF_000169015.1 Bacteroides caccae ATCC 43185 -
GCF_000063585.1 Clostridium botulinum A str. ATCC 3502 +
GCF_000269925.1 Lactococcus garvieae ATCC 49156 -
GCF_000019725.1 Methylobacterium radiotolerans JCM 2831 -
GCF_000012825.1 Bacteroides vulgatus ATCC 8482 -
GCF_000012845.1 Parabacteroides distasonis ATCC 8503 -
GCF_000183685.1 Staphylococcus hominis subsp. hominis C80 -
GCF_000155915.2 Lactobacillus jensenii 1153 -
GCF_000017025.1 Clostridium botulinum A str. ATCC 19397 +
GCF_000017045.1 Clostridium botulinum A str. Hall +
GCF_000171075.1 Clostridium botulinum Bf +
GCF_000154825.1 Anaerofustis stercorihominis DSM 17244 +
GCF_000154565.1 Anaerotruncus colihominis DSM 17241 +
GCF_000156215.1 Collinsella stercoris DSM 13279 -
GCF_000154525.1 Bacteroides stercoris ATCC 43183 -
GCF_000163735.1 Veillonella sp. 6_1_27 -
GCF_000013465.1 Staphylococcus aureus subsp. aureus USA300_FPR3757 -
GCF_000173795.1 Catenibacterium mitsuokai DSM 15897 +
GCF_000218365.1 Bacteroides sp. 1_1_30 -
GCF_000159855.2 Bacteroides sp. 3_2_5 -
GCF_000185585.1 Bacteroides sp. 4_1_36 -
GCF_000158375.2 Clostridium sp. 7_2_43FAA +
GCF_000158415.2 Escherichia sp. 4_1_40B -
GCF_000158275.2 Fusobacterium nucleatum subsp. animalis 7_1 +
GCF_000163715.1 Veillonella sp. 3_1_44 -
GCF_000017005.1 Streptococcus gordonii str. Challis substr. CH1 -
GCF_000163655.1 Bacteroides sp. 3_1_19 -
GCF_000158215.3 Fusobacterium periodonticum 2_1_31 +
GCF_000163915.2 Fusobacterium nucleatum subsp. vincentii 3_1_27 +
GCF_000162355.2 Fusobacterium nucleatum subsp. animalis 3_1_33 +
GCF_000162235.2 Fusobacterium nucleatum subsp. vincentii 3_1_36A2 +
GCF_000158235.1 Fusobacterium gonidiaformans 3-1-5R +
GCF_000158255.2 Fusobacterium nucleatum subsp. vincentii 4_1_13 +
GCF_000158835.2 Fusobacterium gonidiaformans ATCC 25563 +
GCF_000158195.2 Fusobacterium mortiferum ATCC 9817 +
GCF_000158315.2 Fusobacterium ulcerans ATCC 49185 +
GCF_000159915.2 Fusobacterium varium ATCC 27725 +
GCF_000163935.1 Fusobacterium periodonticum 1_1_41FAA +
GCF_000155875.1 Coprococcus comes ATCC 27758 +
GCF_000155085.1 Clostridium sporogenes ATCC 15579 +
GCF_000154985.1 Streptococcus infantarius subsp. infantarius ATCC BAA-102 -
GCF_000154865.1 Providencia stuartii ATCC 25827 -
GCF_000155205.1 Ruminococcus lactaris ATCC 29176 -
GCF_000157975.1 Blautia hydrogenotrophica DSM 10507 -
GCF_000156195.1 Bacteroides finegoldii DSM 17565 -
GCF_000155815.1 Bacteroides eggerthii DSM 20697 -
GCF_000156075.1 Bacteroides dorei DSM 17855 -
GCF_000265095.1 Bifidobacterium bifidum BGN4 -
GCF_000163955.1 Edwardsiella tarda ATCC 23685 -
GCF_000156015.1 Butyrivibrio crossotus DSM 2876 +
GCF_000019825.1 Streptococcus pneumoniae G54 -
GCF_000173415.1 Providencia alcalifaciens DSM 30120 -
GCF_000156175.1 Collinsella intestinalis DSM 13280 -
GCF_000159135.1 Corynebacterium striatum ATCC 6940 -
GCF_000160835.1 Lactobacillus antri DSM 16041 -
GCF_000159195.1 Lactobacillus buchneri ATCC 11577 -
GCF_000159215.1 Lactobacillus fermentum ATCC 14931 -
GCF_000160875.1 Lactobacillus iners DSM 13335 -
GCF_000159495.1 Lactobacillus paracasei subsp. paracasei ATCC 25302 -
GCF_000160175.1 Lactobacillus rhamnosus LMS2-1 -
GCF_000159375.2 Lactobacillus ruminis ATCC 25644 -
GCF_000159415.1 Lactobacillus ultunensis DSM 16047 -
GCF_000187265.1 Streptococcus equinus ATCC 9812 -
GCF_000024105.1 Anaerococcus prevotii DSM 20548 +
GCF_000161515.1 Bacillus thuringiensis serovar thuringiensis str. T01001 -
GCF_000156535.1 Roseburia intestinalis L1-82 +
GCF_000175335.1 Clostridium botulinum E1 str. 'BoNT E Beluga' +
GCF_000156495.1 Parabacteroides johnsonii DSM 18315 -
GCF_000320405.1 Clostridium celatum DSM 1785 +
GCF_000163895.2 Filifactor alocis ATCC 35896 +
GCF_000173915.1 Gemella haemolysans ATCC 10379 -
GCF_000163515.2 Erysipelotrichaceae bacterium 5_2_54FAA +
GCF_000177015.3 Ruminococcaceae bacterium D16 +
GCF_000144405.1 Prevotella melaninogenica ATCC 25845 -
GCF_000174815.1 Porphyromonas endodontalis ATCC 35406 +
GCF_000159075.2 Bacteroides sp. D2 -
GCF_000158295.2 Fusobacterium necrophorum D12 +
GCF_000158535.2 Fusobacterium nucleatum subsp. animalis D11 +
GCF_000158475.2 Oxalobacter formigenes HOxBLS -
GCF_000158555.2 Coprobacillus sp. D7 +
GCF_000173355.1 Anaerococcus hydrogenalis DSM 7454 +
GCF_000204335.2 Gemella sanguinis M325 -
GCF_000163095.1 Pediococcus acidilactici 7_4 -
GCF_000230275.1 Acidaminococcus intestini RyC-MR95 +
GCF_000162075.1 Acinetobacter junii SH205 -
GCF_000225345.1 Roseburia hominis A2-183 +
GCF_000163675.1 Bacteroides sp. D22 -
GCF_000160595.1 Leuconostoc mesenteroides subsp. cremoris ATCC 19254 -
GCF_000025305.1 Acidaminococcus fermentans DSM 20731 +
GCF_000022245.1 Shigella flexneri 2002017 -
GCF_000306805.1 Streptococcus intermedius JTH08 -
GCF_000161975.1 Eubacterium saphenum ATCC 49989 +
GCF_000147675.1 Peptostreptococcus stomatis DSM 17678 +
GCF_000174775.1 Porphyromonas uenonis 60-3 +
GCF_000174195.1 Roseburia inulinivorans DSM 16841 +
GCF_000182605.1 Clostridium butyricum E4 str. BoNT E BL5262 +
GCF_000024185.1 Methanobrevibacter ruminantium M1 -
GCF_000092365.1 Arcanobacterium haemolyticum DSM 20595 -
GCF_000332875.2 Anaerostipes hadrus DSM 3319 +
GCF_000163295.1 Anaerococcus vaginalis ATCC 51170 +
GCF_900291485.1 Ruminococcus bromii L2-63 -
GCF_000185605.1 Bacteroides eggerthii 1_2_48FAA -
GCF_000176515.1 Grimontia hollisae CIP 101886 -
GCF_000177375.1 Bulleidia extructa W1219 -
GCF_000265365.1 Alistipes finegoldii DSM 17242 -
GCF_000182855.2 Lactobacillus amylovorus GRL 1112 -
GCF_000165905.1 Bifidobacterium bifidum PRL2010 -
GCF_000186945.2 Solobacterium moorei F0204 +
GCF_000210575.1 Alistipes shahii WAL 8301 -
GCF_000296465.1 Barnesiella intestinihominis YIT 11860 -
GCF_000242435.1 Dialister succinatiphilus YIT 11850 -
GCF_000213555.1 Dysgonomonas gadei ATCC BAA-286 -
GCF_000243215.1 Odoribacter laneus YIT 12061 -
GCF_000186545.1 Streptococcus anginosus 1_2_62CV -
GCF_000230915.1 Paenibacillus lactis 154 -
GCF_000166035.1 Faecalibacterium cf. prausnitzii KLE1255 +
GCF_000148065.1 Enterococcus faecalis TX2134 -
GCF_000179055.1 Prevotella bryantii B14 -
GCF_000092345.1 Clostridium botulinum F str. 230613 +
GCF_000165835.1 Achromobacter xylosoxidans A8 -
GCF_000164695.2 Rothia dentocariosa ATCC 17931 -
GCF_000233955.1 Paraprevotella clara YIT 11840 -
GCF_000205165.1 Paraprevotella xylaniphila YIT 11841 -
GCF_000188195.1 Succinatimonas hippei YIT 12066 -
GCF_000195615.1 Bacteroides clarus YIT 12056 -
GCF_000195635.1 Bacteroides fluxus YIT 12057 -
GCF_000146325.1 Pediococcus acidilactici DSM 20284 -
GCF_000210835.1 Bacteroides fragilis 638R -
GCF_000179675.1 Prevotella disiens FB035-09AN -
GCF_000179735.1 Veillonella atypica ACS-049-V-Sch6 -
GCF_000184945.1 Prevotella buccae ATCC 33574 -
GCF_000208825.1 Aeromonas caviae Ae398 -
GCF_000212375.1 Porphyromonas asaccharolytica DSM 20707 +
GCF_000164965.1 Bifidobacterium bifidum S17 -
GCF_000185505.1 Pseudoramibacter alactolyticus ATCC 23263 +
GCF_000526055.1 Eubacterium sulci ATCC 35585 +
GCF_000185845.1 Prevotella salivae DSM 15606 -
GCF_000186465.1 Streptococcus australis ATCC 700641 -
GCF_000187465.1 Streptococcus infantis ATCC 700779 -
GCF_000180075.1 Streptococcus vestibularis F0396 -
GCF_000183565.1 Peptoniphilus harei ACS-146-V-Sch2b +
GCF_000204985.1 Lactobacillus johnsonii DPC 6026 -
GCF_000253155.1 Streptococcus oralis Uo5 -
GCF_000334435.1 Clostridium saccharoperbutylacetonicum N1-4(HMT) +
GCF_000526595.1 Cellulosimicrobium cellulans J36 -
GCF_000705495.1 Geobacillus stearothermophilus ATCC 7953 -
GCF_000270145.1 Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 -
GCF_000195105.1 Pseudomonas stutzeri DSM 4166 -
GCF_000227315.1 Peptoniphilus indolicus ATCC 29427 +
GCF_000220235.1 Prevotella nigrescens ATCC 33563 -
GCF_000220255.1 Prevotella pallens ATCC 700821 -
GCF_000204115.1 Aeromonas veronii B565 -
GCF_000340375.1 Eggerthia catenaformis OT 569 = DSM 20559 -