Training data

Legend:  + = trait present  - = trait absent

Genome accession Scientific name Trait presence
GCF_000735435.1 Raoultella planticola ATCC 33531 +
GCF_000222025.1 Haemophilus haemolyticus M19501 -
GCF_000318405.1 Brevundimonas diminuta 470-4 -
GCF_000318135.1 Corynebacterium durum F0235 -
GCF_000219275.1 Acinetobacter lwoffii WJ10621 -
GCF_000245315.1 Bacillus vallismortis DV1-F-3 -
GCF_000221985.1 Streptococcus pseudopneumoniae IS7493 -
GCF_000283495.2 Megasphaera elsdenii DSM 20460 +
GCF_000441535.1 Streptococcus lutetiensis 033 -
GCF_000226135.1 Bacteroides faecis MAJ27 +
GCF_000284555.1 Pseudomonas aeruginosa NCGM2.S1 -
GCF_000257785.1 Streptococcus constellatus subsp. constellatus SK53 -
GCF_000312025.1 Peptoniphilus timonensis JC401 -
GCF_000285995.1 Actinomyces naeslundii str. Howell 279 -
GCF_000381365.1 Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 +
GCF_000426425.1 Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 -
GCF_000701445.1 Brevundimonas bacteroides DSM 4726 -
GCF_000620985.1 Brochothrix thermosphacta DSM 20171 = FSL F6-1036 -
GCF_000379665.1 Butyricimonas synergistica DSM 23225 +
GCF_000519105.1 Butyricimonas virosa DSM 23226 +
GCF_000359585.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 +
GCF_000375525.1 Corynebacterium propinquum DSM 44285 -
GCF_000378385.1 Paenibacillus daejeonensis DSM 15491 +
GCF_000372405.1 Porphyromonas somerae DSM 23386 -
GCF_000430565.1 Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 -
GCF_000425525.1 Ruminococcus gauvreauii DSM 19829 -
GCF_000425005.1 Solobacterium moorei DSM 22971 -
GCF_000420065.1 Varibaculum cambriense DSM 15806 -
GCF_000262005.1 Pseudomonas monteilii QM -
GCF_000286435.2 Morganella morganii subsp. morganii KT -
GCF_000258205.1 Rothia aeria F0474 -
GCF_000248095.2 Lactobacillus mucosae LM1 -
GCF_000296575.1 Brachyspira pilosicoli B2904 +
GCF_000406945.1 Enterococcus dispar ATCC 51266 -
GCF_000406985.1 Enterococcus durans ATCC 6056 -
GCF_000479315.1 Streptococcus sp. I-P16 -
GCF_000275465.1 Alcaligenes faecalis subsp. faecalis NCIB 8687 -
GCF_000393955.1 Enterococcus asini ATCC 700915 -
GCF_000394035.1 Enterococcus phoeniculicola ATCC BAA-412 -
GCF_000297455.1 Staphylococcus equorum subsp. equorum Mu2 -
GCF_000284595.1 Stenotrophomonas maltophilia D457 -
GCF_000283115.1 Lactobacillus coryniformis subsp. coryniformis CECT 5711 -
GCF_000263775.1 Staphylococcus capitis QN1 -
GCF_000401215.1 Clostridium sartagoforme AAU1 +
GCF_000411435.1 Bifidobacterium breve HPH0326 -
GCF_000398925.1 Butyricicoccus pullicaecorum 1.2 +
GCF_000293805.1 Paenibacillus alvei DSM 29 +
GCF_000287215.2 Aeromonas media WS -
GCF_000295715.1 Staphylococcus arlettae CVD059 -
GCF_000621245.1 Pseudomonas monteilii NBRC 103158 = DSM 14164 -
GCF_000368885.1 Acinetobacter radioresistens NIPH 2130 -
GCF_000369085.1 Acinetobacter haemolyticus NIPH 261 -
GCF_000739855.1 Alcaligenes faecalis subsp. faecalis NBRC 13111 -
GCF_000298875.1 Leuconostoc gelidum JB7 -
GCF_000314575.1 Brevibacterium casei S18 -
GCF_000313955.2 Lysinibacillus fusiformis ZB2 -
GCF_000403375.2 Paenibacillus barengoltzii G22 +
GCF_000467875.1 Prevotella disiens JCM 6334 = ATCC 29426 -
GCF_000328345.1 Brevibacillus agri BAB-2500 -
GCF_000347695.1 Bifidobacterium thermophilum RBL67 -
GCF_000469345.1 Eubacterium ramulus ATCC 29099 +
GCF_000347875.1 Streptococcus mutans ATCC 25175 -
GCF_000328905.1 Enterobacter hormaechei YT2 +
GCF_000328885.1 Enterobacter hormaechei YT3 +
GCF_000342105.1 Bacillus sonorensis L12 -
GCF_000494875.1 Staphylococcus pasteuri SP1 -
GCF_000424025.1 Clostridium paraputrificum AGR2156 +
GCF_000424205.1 Clostridium cadaveris AGR2141 +
GCF_000424105.1 Lachnospira multipara ATCC 19207 +
GCF_000390025.1 Gordonia terrae C-6 -
GCF_000409755.1 Clostridium butyricum DSM 10702 +
GCF_000488855.1 Eubacterium brachy ATCC 33089 +
GCF_000497735.1 Bifidobacterium longum E18 -
GCF_000518765.1 Ruminococcus flavefaciens ATCC 19208 +
GCF_000422085.1 Serratia liquefaciens ATCC 27592 -
GCF_000467225.1 Staphylococcus xylosus DMB3-Bh1 -
GCF_000687995.1 Selenomonas ruminantium AC2024 +
GCF_000525775.1 Mogibacterium timidum ATCC 33093 -
GCF_000687615.1 Bifidobacterium boum DSM 20432 -
GCF_000687635.1 Bifidobacterium ruminantium DSM 6489 -
GCF_000702905.1 Mitsuokella jalaludinii DSM 13811 -
GCF_000513495.2 Staphylococcus cohnii hu-01 -
GCF_000771345.1 Bifidobacterium coryneforme DSM 20216 -
GCF_000741285.1 Bifidobacterium mongoliense DSM 21395 -
GCF_000512125.1 Escherichia albertii KF1 +
GCF_000599565.1 Trueperella pyogenes MS249 -
GCF_000007645.1 Staphylococcus epidermidis ATCC 12228 -
GCF_000013285.1 Clostridium perfringens ATCC 13124 +
GCF_000007525.1 Bifidobacterium longum NCC2705 -
GCF_000196095.1 Vibrio parahaemolyticus RIMD 2210633 -
GCF_000011065.1 Bacteroides thetaiotaomicron VPI-5482 +
GCF_000010105.1 Rhodococcus erythropolis PR4 -
GCF_000007585.1 Porphyromonas gingivalis W83 -
GCF_000008065.1 Lactobacillus johnsonii NCC 533 -
GCF_000165575.1 Haemophilus influenzae R2846 -
GCF_000025925.1 Prevotella ruminicola 23 -
GCF_000025985.1 Bacteroides fragilis NCTC 9343 +
GCF_000008765.1 Clostridium acetobutylicum ATCC 824 +
GCF_000011985.1 Lactobacillus acidophilus NCFM -
GCF_000006865.1 Lactococcus lactis subsp. lactis Il1403 -
GCF_000014505.1 Pediococcus pentosaceus ATCC 25745 -
GCF_000018045.1 Citrobacter koseri ATCC BAA-895 -
GCF_000017665.1 Cronobacter sakazakii ATCC BAA-894 -
GCF_000016965.1 Clostridium beijerinckii NCIMB 8052 +
GCF_000009925.1 Bacteroides fragilis YCH46 +
GCF_000012005.1 Shigella dysenteriae Sd197 -
GCF_000026065.1 Lactobacillus sakei subsp. sakei 23K -
GCF_000010185.1 Finegoldia magna ATCC 29328 -
GCF_000168015.1 Yersinia frederiksenii ATCC 33641 -
GCF_000016865.1 Pseudomonas putida F1 -
GCF_000751775.1 Bacillus thermoamylovorans -
GCF_000010165.1 Brevibacillus brevis NBRC 100599 -
GCF_000010425.1 Bifidobacterium adolescentis ATCC 15703 -
GCF_000013485.1 Streptococcus pyogenes MGAS9429 -
GCF_000008865.2 Escherichia coli O157:H7 str. Sakai +
GCF_000168575.2 Listeria monocytogenes FSL R2-561 -
GCF_000155395.1 Bifidobacterium bifidum NCIMB 41171 -
GCF_000021305.1 Bacillus cereus G9842 -
GCF_000015385.1 Lactobacillus helveticus DPC 4571 -
GCF_000010385.1 Escherichia coli SE11 +
GCF_000153905.1 Blautia obeum ATCC 29174 -
GCF_000154065.1 Dorea longicatena DSM 13814 +
GCF_000156375.1 Desulfovibrio piger ATCC 29098 -
GCF_000154425.1 Coprococcus eutactus ATCC 27759 -
GCF_000239295.1 Flavonifractor plautii ATCC 29863 -
GCF_000154125.1 Bacteroides ovatus ATCC 8483 +
GCF_000154105.1 Parabacteroides merdae ATCC 43184 -
GCF_000154205.1 Bacteroides uniformis ATCC 8492 +
GCF_000162015.1 Faecalibacterium prausnitzii A2-165 -
GCF_000154385.1 Faecalibacterium prausnitzii M21/2 -
GCF_000169015.1 Bacteroides caccae ATCC 43185 +
GCF_000169035.1 Collinsella aerofaciens ATCC 25986 +
GCF_000063585.1 Clostridium botulinum A str. ATCC 3502 +
GCF_000269925.1 Lactococcus garvieae ATCC 49156 -
GCF_000012825.1 Bacteroides vulgatus ATCC 8482 +
GCF_000012845.1 Parabacteroides distasonis ATCC 8503 -
GCF_000183685.1 Staphylococcus hominis subsp. hominis C80 -
GCF_000155915.2 Lactobacillus jensenii 1153 -
GCF_000017025.1 Clostridium botulinum A str. ATCC 19397 +
GCF_000017045.1 Clostridium botulinum A str. Hall +
GCF_000171075.1 Clostridium botulinum Bf +
GCF_000154465.1 Alistipes putredinis DSM 17216 +
GCF_000154565.1 Anaerotruncus colihominis DSM 17241 +
GCF_000156215.1 Collinsella stercoris DSM 13279 +
GCF_000154525.1 Bacteroides stercoris ATCC 43183 +
GCF_000163735.1 Veillonella sp. 6_1_27 +
GCF_000173795.1 Catenibacterium mitsuokai DSM 15897 -
GCF_000218365.1 Bacteroides sp. 1_1_30 +
GCF_000162555.1 Bacteroides sp. 3_1_23 +
GCF_000162195.1 Bacteroides sp. 3_1_33FAA +
GCF_000159855.2 Bacteroides sp. 3_2_5 +
GCF_000185585.1 Bacteroides sp. 4_1_36 +
GCF_000158515.2 Bacteroides sp. 4_3_47FAA +
GCF_000157075.2 Bacteroides sp. 9_1_42FAA +
GCF_000145315.2 Desulfovibrio sp. 3_1_syn3 -
GCF_000159895.2 Escherichia sp. 1_1_43 +
GCF_000158415.2 Escherichia sp. 4_1_40B +
GCF_000158275.2 Fusobacterium nucleatum subsp. animalis 7_1 -
GCF_000159975.2 Ruminococcus sp. 5_1_39BFAA -
GCF_000163715.1 Veillonella sp. 3_1_44 +
GCF_000157015.1 Bacteroides fragilis 3_1_12 +
GCF_000162515.1 Bacteroides sp. 1_1_14 +
GCF_000162155.1 Bacteroides sp. 2_1_22 +
GCF_000162175.1 Bacteroides sp. 2_1_33B +
GCF_000157055.1 Bacteroides sp. 2_2_4 +
GCF_000163655.1 Bacteroides sp. 3_1_19 +
GCF_000186105.1 Bacteroides sp. 3_1_40A +
GCF_000162355.2 Fusobacterium nucleatum subsp. animalis 3_1_33 -
GCF_000162235.2 Fusobacterium nucleatum subsp. vincentii 3_1_36A2 -
GCF_000158235.1 Fusobacterium gonidiaformans 3-1-5R -
GCF_000161955.2 Streptococcus sp. 2_1_36FAA -
GCF_000158835.2 Fusobacterium gonidiaformans ATCC 25563 -
GCF_000158195.2 Fusobacterium mortiferum ATCC 9817 -
GCF_000155085.1 Clostridium sporogenes ATCC 15579 +
GCF_000154985.1 Streptococcus infantarius subsp. infantarius ATCC BAA-102 -
GCF_000154865.1 Providencia stuartii ATCC 25827 -
GCF_000155205.1 Ruminococcus lactaris ATCC 29176 -
GCF_000172135.1 Bifidobacterium dentium ATCC 27678 -
GCF_000024265.1 Eggerthella lenta DSM 2243 -
GCF_000021245.2 Acinetobacter baumannii AB0057 -
GCF_000156195.1 Bacteroides finegoldii DSM 17565 +
GCF_000155815.1 Bacteroides eggerthii DSM 20697 +
GCF_000156075.1 Bacteroides dorei DSM 17855 +
GCF_000265095.1 Bifidobacterium bifidum BGN4 -
GCF_000163955.1 Edwardsiella tarda ATCC 23685 -
GCF_000155995.1 Enterobacter cancerogenus ATCC 35316 +
GCF_000155975.1 Citrobacter youngae ATCC 29220 -
GCF_000155105.1 Escherichia albertii TW07627 +
GCF_000270285.1 Eggerthella sp. YY7918 -
GCF_000005845.2 Escherichia coli str. K-12 substr. MG1655 +
GCF_000156015.1 Butyrivibrio crossotus DSM 2876 -
GCF_000158055.1 Providencia rettgeri DSM 1131 -
GCF_000156175.1 Collinsella intestinalis DSM 13280 +
GCF_000024225.1 Atopobium parvulum DSM 20469 -
GCF_000159035.1 Actinomyces urogenitalis DSM 15434 -
GCF_000159135.1 Corynebacterium striatum ATCC 6940 -
GCF_000160835.1 Lactobacillus antri DSM 16041 -
GCF_000159175.1 Lactobacillus brevis subsp. gravesensis ATCC 27305 -
GCF_000159195.1 Lactobacillus buchneri ATCC 11577 -
GCF_000159215.1 Lactobacillus fermentum ATCC 14931 -
GCF_000160875.1 Lactobacillus iners DSM 13335 -
GCF_000160175.1 Lactobacillus rhamnosus LMS2-1 -
GCF_000159375.2 Lactobacillus ruminis ATCC 25644 -
GCF_000187265.1 Streptococcus equinus ATCC 9812 -
GCF_000024105.1 Anaerococcus prevotii DSM 20548 -
GCF_000161515.1 Bacillus thuringiensis serovar thuringiensis str. T01001 -
GCF_000172815.1 Bacillus pumilus ATCC 7061 -
GCF_000156535.1 Roseburia intestinalis L1-82 +
GCF_000175335.1 Clostridium botulinum E1 str. 'BoNT E Beluga' +
GCF_000158035.1 Bacteroides cellulosilyticus DSM 14838 +
GCF_000155515.2 Lactobacillus paracasei subsp. paracasei 8700:2 -
GCF_000320405.1 Clostridium celatum DSM 1785 +
GCF_000163895.2 Filifactor alocis ATCC 35896 +
GCF_000160015.1 Veillonella dispar ATCC 17748 +
GCF_000022905.1 Corynebacterium aurimucosum ATCC 700975 -
GCF_000196535.1 Mobiluncus curtisii ATCC 43063 +
GCF_000177015.3 Ruminococcaceae bacterium D16 -
GCF_000144405.1 Prevotella melaninogenica ATCC 25845 -
GCF_000174815.1 Porphyromonas endodontalis ATCC 35406 -
GCF_000174015.1 Atopobium rimae ATCC 49626 -
GCF_000157095.2 Bacteroides sp. D1 +
GCF_000159075.2 Bacteroides sp. D2 +
GCF_000158535.2 Fusobacterium nucleatum subsp. animalis D11 -
GCF_000173355.1 Anaerococcus hydrogenalis DSM 7454 +
GCF_000185645.1 Gemella morbillorum M424 -
GCF_000185705.2 Bilophila wadsworthia 3_1_6 -
GCF_000162275.1 Parabacteroides sp. D13 -
GCF_000157255.1 Enterococcus gallinarum EG2 -
GCF_000412335.2 Cedecea davisae DSM 4568 -
GCF_000230275.1 Acidaminococcus intestini RyC-MR95 +
GCF_000162055.1 Acinetobacter johnsonii SH046 -
GCF_000162075.1 Acinetobacter junii SH205 -
GCF_000161935.1 Lactobacillus coleohominis 101-4-CHN -
GCF_000162255.1 Lactobacillus crispatus 125-2-CHN -
GCF_000026225.1 Escherichia fergusonii ATCC 35469 +
GCF_000225345.1 Roseburia hominis A2-183 +
GCF_000160635.1 Oribacterium sinus F0268 -
GCF_000160575.1 Weissella paramesenteroides ATCC 33313 -
GCF_000178475.1 Lactobacillus amylolyticus DSM 11664 -
GCF_000162215.1 Bacteroides sp. D20 +
GCF_000163675.1 Bacteroides sp. D22 +
GCF_000025305.1 Acidaminococcus fermentans DSM 20731 +
GCF_000022245.1 Shigella flexneri 2002017 -
GCF_000160075.2 Abiotrophia defectiva ATCC 49176 -
GCF_000160055.1 Dialister invisus DSM 15470 -
GCF_000174775.1 Porphyromonas uenonis 60-3 -
GCF_000174195.1 Roseburia inulinivorans DSM 16841 +
GCF_000162475.2 Granulicatella elegans ATCC 700633 -
GCF_000159995.1 Alloprevotella tannerae ATCC 51259 -
GCF_000188175.1 Phascolarctobacterium succinatutens YIT 12067 -
GCF_000182605.1 Clostridium butyricum E4 str. BoNT E BL5262 +
GCF_000143845.1 Olsenella uli DSM 7084 -
GCF_000160675.1 Granulicatella adiacens ATCC 49175 -
GCF_000174895.1 Ruminococcus flavefaciens FD-1 +
GCF_000182645.1 Ochrobactrum intermedium LMG 3301 -
GCF_000163755.1 Scardovia inopinata F0304 -
GCF_000178835.2 Cellulosilyticum lentocellum DSM 5427 +
GCF_000092365.1 Arcanobacterium haemolyticum DSM 20595 -
GCF_000332875.2 Anaerostipes hadrus DSM 3319 -
GCF_000188315.1 Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 -
GCF_000185605.1 Bacteroides eggerthii 1_2_48FAA +
GCF_000176515.1 Grimontia hollisae CIP 101886 -
GCF_000177055.1 Prevotella timonensis CRIS 5C-B1 -
GCF_000177375.1 Bulleidia extructa W1219 -
GCF_000265365.1 Alistipes finegoldii DSM 17242 -
GCF_000182855.2 Lactobacillus amylovorus GRL 1112 -
GCF_000179635.2 Ruminococcus albus 7 = DSM 20455 -
GCF_000178275.1 Bacteroides ovatus SD CMC 3f +
GCF_000178215.1 Bacteroides xylanisolvens SD CC 1b +
GCF_000186945.2 Solobacterium moorei F0204 -
GCF_000210575.1 Alistipes shahii WAL 8301 -
GCF_000146305.1 Edwardsiella tarda FL6-60 -
GCF_000296465.1 Barnesiella intestinihominis YIT 11860 -
GCF_000315485.1 Bacteroides oleiciplenus YIT 12058 +
GCF_000225705.1 Collinsella tanakaei YIT 12063 +
GCF_000242435.1 Dialister succinatiphilus YIT 11850 -
GCF_000243215.1 Odoribacter laneus YIT 12061 -
GCF_000186545.1 Streptococcus anginosus 1_2_62CV -
GCF_000166035.1 Faecalibacterium cf. prausnitzii KLE1255 -
GCF_000179055.1 Prevotella bryantii B14 -
GCF_000092345.1 Clostridium botulinum F str. 230613 +
GCF_000164695.2 Rothia dentocariosa ATCC 17931 -
GCF_000205165.1 Paraprevotella xylaniphila YIT 11841 -
GCF_000188195.1 Succinatimonas hippei YIT 12066 -
GCF_000195615.1 Bacteroides clarus YIT 12056 +
GCF_000195635.1 Bacteroides fluxus YIT 12057 +
GCF_000193395.1 Prevotella denticola F0289 -
GCF_000271405.2 Enterococcus hirae ATCC 9790 -
GCF_000210835.1 Bacteroides fragilis 638R +
GCF_000210895.1 Haemophilus parainfluenzae T3T1 -
GCF_000179675.1 Prevotella disiens FB035-09AN -
GCF_000179735.1 Veillonella atypica ACS-049-V-Sch6 +
GCF_000262545.1 Prevotella bivia DSM 20514 -
GCF_000180155.1 Actinomyces oris K20 -
GCF_000185145.2 Prevotella oralis ATCC 33269 -
GCF_000212375.1 Porphyromonas asaccharolytica DSM 20707 -
GCF_000164965.1 Bifidobacterium bifidum S17 -
GCF_000185505.1 Pseudoramibacter alactolyticus ATCC 23263 +
GCF_000526055.1 Eubacterium sulci ATCC 35585 +
GCF_000187585.1 Streptococcus peroris ATCC 700780 -
GCF_000185845.1 Prevotella salivae DSM 15606 -
GCF_000186465.1 Streptococcus australis ATCC 700641 -
GCF_000187855.1 Streptococcus cristatus ATCC 51100 -
GCF_000184325.1 Vibrio furnissii NCTC 11218 +
GCF_000180075.1 Streptococcus vestibularis F0396 -
GCF_000364445.1 Methylobacterium mesophilicum SR1.6/6 -
GCF_000204985.1 Lactobacillus johnsonii DPC 6026 -
GCF_000186325.1 Dietzia cinnamea P4 -
GCF_000193635.1 Weissella cibaria KACC 11862 -
GCF_000253155.1 Streptococcus oralis Uo5 -
GCF_000334435.1 Clostridium saccharoperbutylacetonicum N1-4(HMT) +
GCF_000221505.1 Lactobacillus oris F0423 -
GCF_000215645.1 Corynebacterium ulcerans 809 -
GCF_000270145.1 Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 -
GCF_000195105.1 Pseudomonas stutzeri DSM 4166 -
GCF_000227315.1 Peptoniphilus indolicus ATCC 29427 -
GCF_000220235.1 Prevotella nigrescens ATCC 33563 -
GCF_000340375.1 Eggerthia catenaformis OT 569 = DSM 20559 -