Training data

Legend:  + = trait present  - = trait absent

Genome accession Scientific name Trait presence
GCF_000219275.1 Acinetobacter lwoffii WJ10621 -
GCF_000233655.1 Brachybacterium paraconglomeratum LC44 +
GCF_000257785.1 Streptococcus constellatus subsp. constellatus SK53 -
GCF_000312025.1 Peptoniphilus timonensis JC401 +
GCF_000381365.1 Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 +
GCF_000484655.1 Blautia wexlerae DSM 19850 -
GCF_000379665.1 Butyricimonas synergistica DSM 23225 +
GCF_000519105.1 Butyricimonas virosa DSM 23226 +
GCF_000359585.1 Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 -
GCF_000375525.1 Corynebacterium propinquum DSM 44285 -
GCF_000428565.1 Parabacteroides gordonii DSM 23371 -
GCF_000378725.1 Peptoniphilus lacrimalis DSM 7455 -
GCF_000372405.1 Porphyromonas somerae DSM 23386 -
GCF_000378085.1 Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 -
GCF_000425005.1 Solobacterium moorei DSM 22971 -
GCF_000286435.2 Morganella morganii subsp. morganii KT +
GCF_000296575.1 Brachyspira pilosicoli B2904 +
GCF_000479335.1 Streptococcus sp. I-G2 -
GCF_000479315.1 Streptococcus sp. I-P16 -
GCF_000275465.1 Alcaligenes faecalis subsp. faecalis NCIB 8687 -
GCF_000393955.1 Enterococcus asini ATCC 700915 -
GCF_000394035.1 Enterococcus phoeniculicola ATCC BAA-412 -
GCF_000394055.1 Enterococcus caccae ATCC BAA-1240 -
GCF_000297455.1 Staphylococcus equorum subsp. equorum Mu2 -
GCF_000284595.1 Stenotrophomonas maltophilia D457 -
GCF_000263775.1 Staphylococcus capitis QN1 -
GCF_000332735.1 Staphylococcus warneri SG1 -
GCF_000293805.1 Paenibacillus alvei DSM 29 +
GCF_000621245.1 Pseudomonas monteilii NBRC 103158 = DSM 14164 -
GCF_000739855.1 Alcaligenes faecalis subsp. faecalis NBRC 13111 -
GCF_000467875.1 Prevotella disiens JCM 6334 = ATCC 29426 -
GCF_000347695.1 Bifidobacterium thermophilum RBL67 -
GCF_000347875.1 Streptococcus mutans ATCC 25175 -
GCF_000981805.1 Citrobacter amalonaticus Y19 -
GCF_000338275.1 Staphylococcus xylosus NJ -
GCF_000424205.1 Clostridium cadaveris AGR2141 +
GCF_000424105.1 Lachnospira multipara ATCC 19207 -
GCF_000754645.1 Vibrio fluvialis 560 -
GCF_000390025.1 Gordonia terrae C-6 -
GCF_000409755.1 Clostridium butyricum DSM 10702 -
GCF_000488855.1 Eubacterium brachy ATCC 33089 -
GCF_000497735.1 Bifidobacterium longum E18 -
GCF_000417625.1 Vibrio fluvialis PG41 -
GCF_000422085.1 Serratia liquefaciens ATCC 27592 -
GCF_000733845.1 Geobacillus vulcani PSS1 -
GCF_000513495.2 Staphylococcus cohnii hu-01 -
GCF_000518065.1 Pseudomonas nitroreducens HBP1 -
GCF_000512125.1 Escherichia albertii KF1 +
GCF_000599565.1 Trueperella pyogenes MS249 -
GCF_000007785.1 Enterococcus faecalis V583 -
GCF_000011065.1 Bacteroides thetaiotaomicron VPI-5482 +
GCF_000007585.1 Porphyromonas gingivalis W83 +
GCF_000261025.1 Prevotella intermedia 17 +
GCF_000025985.1 Bacteroides fragilis NCTC 9343 +
GCF_000011985.1 Lactobacillus acidophilus NCFM -
GCF_000006865.1 Lactococcus lactis subsp. lactis Il1403 -
GCF_000018045.1 Citrobacter koseri ATCC BAA-895 +
GCF_000017665.1 Cronobacter sakazakii ATCC BAA-894 -
GCF_000009925.1 Bacteroides fragilis YCH46 +
GCF_000012005.1 Shigella dysenteriae Sd197 -
GCF_000253315.1 Streptococcus salivarius JIM8777 -
GCF_000020225.1 Akkermansia muciniphila ATCC BAA-835 -
GCF_000168015.1 Yersinia frederiksenii ATCC 33641 +
GCF_000177335.1 Pyramidobacter piscolens W5455 -
GCF_000010425.1 Bifidobacterium adolescentis ATCC 15703 -
GCF_000013485.1 Streptococcus pyogenes MGAS9429 -
GCF_000014805.1 Aeromonas hydrophila subsp. hydrophila ATCC 7966 -
GCF_000008865.2 Escherichia coli O157:H7 str. Sakai +
GCF_000014465.1 Lactobacillus brevis ATCC 367 -
GCF_000015385.1 Lactobacillus helveticus DPC 4571 -
GCF_000010385.1 Escherichia coli SE11 +
GCF_000153905.1 Blautia obeum ATCC 29174 -
GCF_000153885.1 Eubacterium ventriosum ATCC 27560 -
GCF_000156375.1 Desulfovibrio piger ATCC 29098 -
GCF_000154405.1 Parvimonas micra ATCC 33270 -
GCF_000154425.1 Coprococcus eutactus ATCC 27759 -
GCF_000154125.1 Bacteroides ovatus ATCC 8483 +
GCF_000154105.1 Parabacteroides merdae ATCC 43184 -
GCF_000154205.1 Bacteroides uniformis ATCC 8492 +
GCF_000154245.1 Clostridium sp. L2-50 -
GCF_000269925.1 Lactococcus garvieae ATCC 49156 -
GCF_000012845.1 Parabacteroides distasonis ATCC 8503 -
GCF_000017045.1 Clostridium botulinum A str. Hall -
GCF_000154465.1 Alistipes putredinis DSM 17216 +
GCF_000154565.1 Anaerotruncus colihominis DSM 17241 +
GCF_000154525.1 Bacteroides stercoris ATCC 43183 +
GCF_000013465.1 Staphylococcus aureus subsp. aureus USA300_FPR3757 -
GCF_000173795.1 Catenibacterium mitsuokai DSM 15897 -
GCF_000162195.1 Bacteroides sp. 3_1_33FAA -
GCF_000185585.1 Bacteroides sp. 4_1_36 -
GCF_000159895.2 Escherichia sp. 1_1_43 +
GCF_000158415.2 Escherichia sp. 4_1_40B +
GCF_000158275.2 Fusobacterium nucleatum subsp. animalis 7_1 +
GCF_000157015.1 Bacteroides fragilis 3_1_12 +
GCF_000017005.1 Streptococcus gordonii str. Challis substr. CH1 -
GCF_000162175.1 Bacteroides sp. 2_1_33B -
GCF_000157055.1 Bacteroides sp. 2_2_4 -
GCF_000163655.1 Bacteroides sp. 3_1_19 -
GCF_000186105.1 Bacteroides sp. 3_1_40A -
GCF_000158215.3 Fusobacterium periodonticum 2_1_31 +
GCF_000163915.2 Fusobacterium nucleatum subsp. vincentii 3_1_27 +
GCF_000162355.2 Fusobacterium nucleatum subsp. animalis 3_1_33 +
GCF_000162235.2 Fusobacterium nucleatum subsp. vincentii 3_1_36A2 +
GCF_000158235.1 Fusobacterium gonidiaformans 3-1-5R +
GCF_000158255.2 Fusobacterium nucleatum subsp. vincentii 4_1_13 +
GCF_000158835.2 Fusobacterium gonidiaformans ATCC 25563 +
GCF_000158315.2 Fusobacterium ulcerans ATCC 49185 -
GCF_000159915.2 Fusobacterium varium ATCC 27725 +
GCF_000163935.1 Fusobacterium periodonticum 1_1_41FAA +
GCF_000154985.1 Streptococcus infantarius subsp. infantarius ATCC BAA-102 -
GCF_000154865.1 Providencia stuartii ATCC 25827 +
GCF_000155205.1 Ruminococcus lactaris ATCC 29176 -
GCF_000172135.1 Bifidobacterium dentium ATCC 27678 -
GCF_000157975.1 Blautia hydrogenotrophica DSM 10507 -
GCF_000024265.1 Eggerthella lenta DSM 2243 -
GCF_000155815.1 Bacteroides eggerthii DSM 20697 +
GCF_000156075.1 Bacteroides dorei DSM 17855 -
GCF_000156395.1 Providencia rustigianii DSM 4541 +
GCF_000163955.1 Edwardsiella tarda ATCC 23685 +
GCF_000155105.1 Escherichia albertii TW07627 +
GCF_000005845.2 Escherichia coli str. K-12 substr. MG1655 +
GCF_000173415.1 Providencia alcalifaciens DSM 30120 +
GCF_000158055.1 Providencia rettgeri DSM 1131 +
GCF_000024225.1 Atopobium parvulum DSM 20469 -
GCF_000023905.1 Leptotrichia buccalis C-1013-b -
GCF_000159715.1 Lactobacillus acidophilus ATCC 4796 -
GCF_000159215.1 Lactobacillus fermentum ATCC 14931 -
GCF_000160875.1 Lactobacillus iners DSM 13335 -
GCF_000159495.1 Lactobacillus paracasei subsp. paracasei ATCC 25302 -
GCF_000148995.1 Listeria grayi DSM 20601 -
GCF_000161515.1 Bacillus thuringiensis serovar thuringiensis str. T01001 -
GCF_000156535.1 Roseburia intestinalis L1-82 -
GCF_000158035.1 Bacteroides cellulosilyticus DSM 14838 -
GCF_000163895.2 Filifactor alocis ATCC 35896 -
GCF_000022905.1 Corynebacterium aurimucosum ATCC 700975 -
GCF_000177015.3 Ruminococcaceae bacterium D16 -
GCF_000174815.1 Porphyromonas endodontalis ATCC 35406 +
GCF_000174015.1 Atopobium rimae ATCC 49626 -
GCF_000173655.1 Corynebacterium amycolatum SK46 -
GCF_000158295.2 Fusobacterium necrophorum D12 +
GCF_000158535.2 Fusobacterium nucleatum subsp. animalis D11 +
GCF_000173355.1 Anaerococcus hydrogenalis DSM 7454 +
GCF_000162055.1 Acinetobacter johnsonii SH046 -
GCF_000162075.1 Acinetobacter junii SH205 -
GCF_000161935.1 Lactobacillus coleohominis 101-4-CHN -
GCF_000162255.1 Lactobacillus crispatus 125-2-CHN -
GCF_000026225.1 Escherichia fergusonii ATCC 35469 +
GCF_000225345.1 Roseburia hominis A2-183 -
GCF_000160635.1 Oribacterium sinus F0268 +
GCF_000178475.1 Lactobacillus amylolyticus DSM 11664 -
GCF_000306805.1 Streptococcus intermedius JTH08 -
GCF_000174775.1 Porphyromonas uenonis 60-3 +
GCF_000024185.1 Methanobrevibacter ruminantium M1 -
GCF_000160675.1 Granulicatella adiacens ATCC 49175 -
GCF_000174895.1 Ruminococcus flavefaciens FD-1 -
GCF_000182645.1 Ochrobactrum intermedium LMG 3301 -
GCF_000411115.1 Capnocytophaga granulosa ATCC 51502 -
GCF_000023085.1 Lactobacillus plantarum JDM1 -
GCF_000092365.1 Arcanobacterium haemolyticum DSM 20595 -
GCF_000466385.1 Aneurinibacillus aneurinilyticus ATCC 12856 -
GCF_000332875.2 Anaerostipes hadrus DSM 3319 +
GCF_000163295.1 Anaerococcus vaginalis ATCC 51170 -
GCF_000188315.1 Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 -
GCF_000185625.1 Eggerthella sp. 1_3_56FAA -
GCF_000185605.1 Bacteroides eggerthii 1_2_48FAA +
GCF_000176515.1 Grimontia hollisae CIP 101886 +
GCF_000179635.2 Ruminococcus albus 7 = DSM 20455 -
GCF_000178275.1 Bacteroides ovatus SD CMC 3f +
GCF_000146305.1 Edwardsiella tarda FL6-60 +
GCF_000231275.1 Alistipes indistinctus YIT 12060 -
GCF_000296465.1 Barnesiella intestinihominis YIT 11860 -
GCF_000315485.1 Bacteroides oleiciplenus YIT 12058 +
GCF_000225705.1 Collinsella tanakaei YIT 12063 -
GCF_000213555.1 Dysgonomonas gadei ATCC BAA-286 +
GCF_000245775.1 Megamonas funiformis YIT 11815 -
GCF_000243215.1 Odoribacter laneus YIT 12061 +
GCF_000164695.2 Rothia dentocariosa ATCC 17931 -
GCF_000205165.1 Paraprevotella xylaniphila YIT 11841 -
GCF_000188195.1 Succinatimonas hippei YIT 12066 -
GCF_000195615.1 Bacteroides clarus YIT 12056 +
GCF_000193395.1 Prevotella denticola F0289 -
GCF_000146325.1 Pediococcus acidilactici DSM 20284 -
GCF_000210835.1 Bacteroides fragilis 638R +
GCF_000146835.1 Campylobacter coli JV20 -
GCF_000212375.1 Porphyromonas asaccharolytica DSM 20707 +
GCF_000185505.1 Pseudoramibacter alactolyticus ATCC 23263 -
GCF_000187585.1 Streptococcus peroris ATCC 700780 -
GCF_000180075.1 Streptococcus vestibularis F0396 -
GCF_000204985.1 Lactobacillus johnsonii DPC 6026 -
GCF_000186325.1 Dietzia cinnamea P4 -
GCF_000253155.1 Streptococcus oralis Uo5 -
GCF_000334435.1 Clostridium saccharoperbutylacetonicum N1-4(HMT) -
GCF_000526595.1 Cellulosimicrobium cellulans J36 -
GCF_000220235.1 Prevotella nigrescens ATCC 33563 +
GCF_000220255.1 Prevotella pallens ATCC 700821 +